Information for 15-CCGGTCTAACTCC (Motif 22)

A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G G T C A A G T C A G T C A T C G A C T G
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 16.1bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGGTCTAACTCC---
GGGGTCAAAGTCCAAT
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGGTCTAACTCC-
-CTGTCTGTCACCT
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCGGTCTAACTCC-
--TGTCTGDCACCT
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCGGTCTAACTCC-
------TAATCCCN
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCGGTCTAACTCC-
AGNGTTCTAATGANN
 A C G T A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCGGTCTAACTCC
AAACCGGTTT------
 A C G T A C G T A C G T A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCGGTCTAACTCC-----
--CGACCAACTGCCATGC
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCGGTCTAACTCC
-GGCTCYAKCAYC
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CCGGTCTAACTCC---
-NGNTCTAGAACCNGV
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:CCGGTCTAACTCC-
------TCACACCT
 A G T C A T G C C T A G A C T G A C G T A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T