Information for 18-CTGAGGTTAG (Motif 36)

A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
Reverse Opposite:
A G T C A C G T C T G A C T G A A G T C G A T C A C G T T A G C C T G A A T C G
p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.716
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif343.4
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets58.3 +/- 24.4bp
Average Position of motif in Background52.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTTAG
CTGTGGTTTN
 A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGTTAG
GCTGTGGTTT-
 A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTTAG
GTCTGTGGTTT-
 A C G T A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTTAG
TTGCGGTTT-
 A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGAGGTTAG
-TRAGGTCA-
 A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGTTAG
NNTGTGGTTT-
 A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGTTAG
TGCTGTGATTT-
 A C G T A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGAGGTTAG
-TGACGTCA-
 A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGTTAG
TTTGCGGTTT-
 A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTTAG
NRRTGACGTCAT
 A C G T A C G T A T G C G A C T A T C G T G C A C T A G T C A G A G C T G A C T G T C A T C A G
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T