Information for 20-TGACTGCTTTACCTGT (Motif 24)

A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
Reverse Opposite:
C T G A A G T C G T C A A C T G A C T G G C A T C T G A C G T A G T C A C T A G A T G C C G T A T A C G C G A T T G A C C G T A
p-value:1e-10
log p-value:-2.336e+01
Information Content per bp:1.697
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.4 +/- 28.9bp
Average Position of motif in Background56.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGACTGCTTTACCTGT
TTAATGTTTAACC---
 A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGACTGCTTTACCTGT
TGACCTTTTGACCTTT
 A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGACTGCTTTACCTGT
TGACCTTTTGACCTC-
 A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGACTGCTTTACCTGT-----
----NNTTTTACATGTANNNT
 A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGCTTTACCTGT
TTAAGTGCTT-------
 A C G T A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGCTTTACCTGT
TTGACCTTTTGACCTT-
 A C G T A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGACTGCTTTACCTGT
NWTGATTRGRTTAWN---
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGACTGCTTTACCTGT
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGACTGCTTTACCTGT
TGATTAAATTA-----
 A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGACTGCTTTACCTGT
NNGTANTGTTTTNC----
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T A T C G G A T C C A G T A C G T G A C T C G T A T A G C T A G C A C G T T C A G A G C T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T A C G T