Information for 20-GGGCTACCCC (Motif 40)

A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.3 +/- 23.0bp
Average Position of motif in Background60.4 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTACCCC-----
NNNNGGTACCCCCCANN
 A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTACCCC-
GGGGATTCCCCC
 A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGCTACCCC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTACCCC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTACCCC--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTACCCC---
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGCTACCCC-------
AGGAGACCCCCAATTTG
 A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGCTACCCC
GGAAATCCCC
 A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTACCCC---
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTACCCC-
KGCCCTTCCCCA
 A C G T A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C A G T C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A