Information for 19-TTAAGTCAATGGC (Motif 33)

A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C G T A C G T A C T G C T G A A G T C C G A T A G C T C G T A C G T A
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 11.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAAGTCAATGGC
AAAAGTCAA----
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTAAGTCAATGGC-
----GTTAATGGCC
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAAGTCAATGGC
--AAAACAATGG-
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTAAGTCAATGGC----
------TAATGGCGGNC
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTAAGTCAATGGC---
--AGGTCANTGACCTN
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTAAGTCAATGGC----
-----TGATTGGCTANN
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTAAGTCAATGGC
--VRAACAATGG-
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTAAGTCAATGGC--
CTCACACAATGGCGC
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAAGTCAATGGC
AATATGCAAATT--
 A C G T A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTAAGTCAATGGC
TTATGCAAATTA-
 A C G T A C G T C T G A C G T A A C T G A G C T G T A C C G T A C G T A A C G T A C T G A C T G A G T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T