Information for 18-AGATCTTGAAAAG (Motif 32)

C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 33.8bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGATCTTGAAAAG
ATGACCTTGAA---
 A C G T C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGATCTTGAAAAG
TGACCTTGAN---
 C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGATCTTGAAAAG
NATGACCTTGA----
 A C G T A C G T C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGATCTTGAAAAG
TGACCTTGAV---
 C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGATCTTGAAAAG
-----TGGAAAA-
 C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGATCTTGAAAAG
-CGGTTTCAAA--
 C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGATCTTGAAAAG---
NNGATCTAGAACCTNNN
 A C G T C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGATCTTGAAAAG
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGATCTTGAAAAG
---NATGGAAAAN
 C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGATCTTGAAAAG-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T C G T A A C T G C G T A C G A T A T G C A C G T C G A T A C T G C G T A C G T A C G T A G T C A A C T G A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T