Information for 13-CTVTCCCAGGACC (Motif 23)

A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
Reverse Opposite:
A C T G A C T G C G A T A G T C A G T C A C G T A C T G A C T G A T C G C G T A A C G T C G T A A C T G
p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.891
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets28.0 +/- 19.2bp
Average Position of motif in Background50.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTVTCCCAGGACC
HTTTCCCASG---
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTVTCCCAGGACC
--GTCACATGAY-
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTVTCCCAGGACC--
ATTTCCCAGVAKSCY
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTVTCCCAGGACC
CTGTTCCTGG---
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTVTCCCAGGACC
----CACAGN---
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTVTCCCAGGACC----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTVTCCCAGGACC-
--GTCACGTGACYV
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTVTCCCAGGACC--
---TCACGTGACCGG
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTVTCCCAGGACC---
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTVTCCCAGGACC
-TTTCCCAGAAN-
 A G T C C G A T T C G A A C G T A T G C T G A C A G T C C G T A A C T G A C T G C G T A A G T C G T A C
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T