Information for 12-CAGACCCAGTGAT (Motif 20)

G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
Reverse Opposite:
C G T A C G A T A T G C G T C A A G T C C A G T A C T G C T A G T C A G G A C T A G T C C A G T A C T G
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.763
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.8 +/- 21.5bp
Average Position of motif in Background34.1 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAGACCCAGTGAT
ATGCCAGACN-------
 A C G T A C G T A C G T A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGACCCAGTGAT----
-TGACCCAGTGACCTAC
 G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCCAGTGAT
CCAGACRSVB----
 A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCCAGTGAT
CCAGACAG------
 A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGACCCAGTGAT
GCCACACCCA-----
 A C G T A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGACCCAGTGAT
GGCCACACCCAN----
 A C G T A C G T A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGACCCAGTGAT---
-AGATGKDGAGATAAG
 G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCCAGTGAT
BCAGACWA------
 A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGACCCAGTGAT-
---ACCACGTGCTC
 G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGACCCAGTGAT
GGCCACACCCA-----
 A C G T A C G T A C G T G T A C G T C A A C T G C T G A A G T C G A T C T G A C G T C A C T A G C A G T A T C G C G T A A C G T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T