Information for 10-GGCKTGCCTG (Motif 17)

C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G
Reverse Opposite:
T G A C C G T A C T A G A C T G G A T C T C G A T G A C T C A G T A G C G A T C
p-value:1e-12
log p-value:-2.889e+01
Information Content per bp:1.619
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif1053.4
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets54.0 +/- 25.1bp
Average Position of motif in Background50.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGCKTGCCTG
NNACTTGCCTT
 A C G T C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCKTGCCTG-----
GGNGCGNCTGTTNNN
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCKTGCCTG---
GGGGCTYGKCTGGGA
 A C G T A C G T C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCKTGCCTG-
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGCKTGCCTG---
---TTGCGTGCVA
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCKTGCCTG
----TGCGTG
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCKTGCCTG-
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A C G T C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCKTGCCTG-
-VBSYGTCTGG
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCKTGCCTG-
---TWGTCTGV
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCKTGCCTG
-CCTCACCTG
 C T A G A T C G A G T C A C T G A G C T C T A G T G A C G A T C C G A T A C T G
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G