Information for 9-CAGGCACVWACTTTCA (Motif 13)

A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A A T C G A C G T C G A T A G C T A C T G A C G T A C T G G A T C A G T C C G A T A C T G
p-value:1e-13
log p-value:-3.137e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.1 +/- 25.8bp
Average Position of motif in Background38.0 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:9
Orientation:forward strand
Alignment:CAGGCACVWACTTTCA-----
---------ACTTTCACTTTC
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA--
--------TGGTTTCAGT
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA------
-------TCACTTTCACTTTCN
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CAGGCACVWACTTTCA-------
---------ACATTCATGACACG
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGGCACVWACTTTCA------
-----GACCACATTCATACAAT
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCACVWACTTTCA
RGGGCACTAACY----
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA-----
---------ACTTTCACTTTC
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA-----
---------ASTTTCACTTCC
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA-
--GHWACAWTGTWDCWA
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A A C G T
A C G T A C G T C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGGCACVWACTTTCA
---AAACAAACATTC-
 A G T C C G T A A C T G C T A G G T A C C G T A G T A C T C G A G C T A G T C A A T G C G A C T A C G T A C G T A G T C C G T A
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T