Information for 5-ACTGCGSAGCAGGGGC (Motif 11)

T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A T G C A G T C C G A T A C T G A G T C C G A T A T C G A T G C A C T G G T A C C G T A A T C G A C G T
p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.878
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.7 +/- 20.2bp
Average Position of motif in Background42.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACTGCGSAGCAGGGGC
----CACAGCAGGGGG
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC--
---DCHCAGCAGGRGGCC
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACTGCGSAGCAGGGGC
-CCACACAGCAGGAGA
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTGCGSAGCAGGGGC
-CCACACAGCAGGAGA
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC--
---NCGCAGCGGGGGGTC
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC--
----CACAGCGGGGGGTC
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTGCGSAGCAGGGGC
-GAGCACAGCAGGACA
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC--
------SDGCAGGTGCNS
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC
----CGCAGCTGCG--
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTGCGSAGCAGGGGC
---DCTCAGCAGG---
 T G C A A T G C A C G T A C T G A G T C A T C G A T G C C G T A A C T G A G T C C G T A A C T G A T C G A C T G C T A G A G T C
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T