Information for 13-HAGGGACCGT (Motif 9)

G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T
Reverse Opposite:
G T C A G T A C T C A G A T C G A C G T A G T C A G T C A G T C G A C T C G T A
p-value:1e-17
log p-value:-3.957e+01
Information Content per bp:1.709
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif136.3
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets53.3 +/- 26.1bp
Average Position of motif in Background57.5 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---HAGGGACCGT
GGTTAGAGACCT-
 A C G T A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:HAGGGACCGT
TGGGGA----
 G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--HAGGGACCGT
GAAAGTGAAAGT
 A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---HAGGGACCGT--
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----HAGGGACCGT--
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----HAGGGACCGT
TCCCNNGGGACN--
 A C G T A C G T A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-HAGGGACCGT------
ATGGAAACCGTTATTTT
 A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-HAGGGACCGT-----
NNNGTGACCTTTGNNN
 A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:HAGGGACCGT--
--NTGACCTTGA
 G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---HAGGGACCGT----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T G C A T C T G A A C T G T C A G A C T G C G T A T A G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C