Information for 6-ATRTTAATTYTCAGAA (Motif 8)

C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
Reverse Opposite:
A C G T A C G T A T G C A C G T A C T G G C T A T C G A C G T A G T C A A C G T A C G T G C T A C T G A A G C T C G T A G C A T
p-value:1e-12
log p-value:-2.763e+01
Information Content per bp:1.724
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.0 +/- 23.0bp
Average Position of motif in Background46.5 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATRTTAATTYTCAGAA
ATATTAATTAA-----
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATRTTAATTYTCAGAA-
-----NTTTCTNAGAAA
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATRTTAATTYTCAGAA
----TAATTTGCATAA
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
A C G T A C G T A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATRTTAATTYTCAGAA-
----AAATTAGCATAAT
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATRTTAATTYTCAGAA-
---CTAATTTGCATATT
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A A C G T
A C G T A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATRTTAATTYTCAGAA
----TAATTTGCATAA
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
A C G T A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATRTTAATTYTCAGAA
NCNTTTGTTATTTNN-----
 A C G T A C G T A C G T A C G T C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATRTTAATTYTCAGAA
AANTTATTAATTAATTA--
 A C G T A C G T A C G T C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATRTTAATTYTCAGAA
TTTATTAATTGCNNGN-
 A C G T C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T A C G T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATRTTAATTYTCAGAA
--NTTAATTGNN----
 C G T A C G A T C T G A A G C T C G A T C G T A T G C A A C G T G A C T A G C T C A G T T A G C G T C A A T C G G T C A C G T A
A C G T A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T A C G T A C G T A C G T