Information for 8-ACGTATCAAA (Motif 15)

T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A
Reverse Opposite:
A G C T A C G T C G A T C A T G T G C A G A C T C G T A G T A C T A C G A G C T
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.690
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif475.5
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets51.8 +/- 30.9bp
Average Position of motif in Background49.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACGTATCAAA
AATGTATCAAT
 A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACGTATCAAA---
ACCCGTATCAAATTT
 A C G T A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ACGTATCAAA
----ATTAAA
 T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACGTATCAAA------
NNNAGATCAAAGGANNN
 A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACGTATCAAA------
TATAGATCAAAGGAAAA
 A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACGTATCAAA------
NANAGATCAAAGGGNNN
 A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACGTATCAAA-----
TCACCCATCAATAAACA
 A C G T A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACGTATCAAA
CGGTTTCAAA
 T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACGTATCAAA--
--ACATCAAAGG
 T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACGTATCAAA------
TATAGATCAAAGGAAAA
 A C G T T C G A A T G C C A T G G C A T C T G A A C G T G T A C G C T A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A