Information for 17-CTGTAGGACAATG (Motif 24)

A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A G T A C C T G A C T A G
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 19.9bp
Average Position of motif in Background72.5 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTGTAGGACAATG-
----AAAACAATGG
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:CTGTAGGACAATG--
------GACAATGNN
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTGTAGGACAATG-
----VRAACAATGG
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTGTAGGACAATG-
----VRRACAAWGG
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CTGTAGGACAATG--
-----RAACAATGGN
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGTAGGACAATG-----
--AATGAACAATGGAATT
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTGTAGGACAATG--
-----GAACAATGGN
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTGTAGGACAATG-
----RNAACAATGG
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:CTGTAGGACAATG
-------ACAAAG
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGTAGGACAATG-
----GGAACAAAGR
 A G T C A G C T A C T G A C G T C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G