Information for 9-ATTTAGACTTTCTTCM (Motif 9)

C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
Reverse Opposite:
A C G T T C A G C G T A C G T A A C T G C G T A G C T A C T G A A T C G C G A T G A T C G A C T C G T A C G T A C G T A A C G T
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.719
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.5 +/- 20.8bp
Average Position of motif in Background45.9 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATTTAGACTTTCTTCM
ACTTTCACTTTC----
 C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATTTAGACTTTCTTCM
ANTTTCGCTTTCGN--
 C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATTTAGACTTTCTTCM
AGTTTCAGTTTC----
 C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGACTTTCTTCM
NTAATTAATAT--------
 A C G T A C G T A C G T C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAGACTTTCTTCM
NATTCAAAT--------
 A C G T C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:6
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------ATTTAGACTTTCTTCM
TAATTAATTAATAACTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ATTTAGACTTTCTTCM
ATTAACACCT------
 C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGACTTTCTTCM-
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:ATTTAGACTTTCTTCM----
------TTTTTTTTCNNGTN
 C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----ATTTAGACTTTCTTCM-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T G C A T C G T A C A T G G C T A A T G C A G C T C G A T A C G T G T A C C G A T A C G T A G T C G T C A A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T