Information for 25-MTGTAATTACAKK (Motif 36)

G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
Reverse Opposite:
G T A C G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.889
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 31.7bp
Average Position of motif in Background10.5 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---MTGTAATTACAKK
TATTGGTAATTACCTT
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--MTGTAATTACAKK--
NNNGGTAATTATNGNGN
 A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---MTGTAATTACAKK
TTGGGGTAATTAACGT
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---MTGTAATTACAKK
NTNAGGTAATTACCTT
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---MTGTAATTACAKK
CTGAGGTAATTACCNC
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PH0023.1_Dlx4/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--MTGTAATTACAKK--
GTCGGTAATTATNGNGN
 A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:MTGTAATTACAKK---
-TNGAATTTCATTNAN
 G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:MTGTAATTACAKK
ADBTAATTAR---
 G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:MTGTAATTACAKK
-TCTAATTAAA--
 G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T A C G T

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---MTGTAATTACAKK
NTGAGCTAATTACCNT
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T C G T A C T G A A G C T A C G T C G T A A G T C C G T A A C G T C A G T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T