Information for 13-ACGGCTGTCT (Motif 35)

C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A C T G A T G C A G T C A C T G A C G T
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 24.6bp
Average Position of motif in Background88.7 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ACGGCTGTCT--
----CTGTCTGG
 C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACGGCTGTCT--
--VBSYGTCTGG
 C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGGCTGTCT
BAACAGCTGT--
 A C G T A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCTGTCT
TGACAGCTGTCA
 A C G T A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ACGGCTGTCT
---GCTGTG-
 C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACGGCTGTCT
AACAGCTGTT-
 A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCTGTCT
TGACAGCTGTCA
 A C G T A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCTGTCT
TGACACCTGTCA
 A C G T A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACGGCTGTCT-
---GCTGTCAA
 C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCTGTCT
TGACACCTGTCA
 A C G T A C G T C G T A A G T C A C T G A T C G A G T C A C G T A C T G A C G T A G T C A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A