Information for 12-CTAGATATCT (Motif 26)

A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A G C T C G T A C G A T A G T C A C G T C T G A A C T G
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.882
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.8 +/- 30.6bp
Average Position of motif in Background53.0 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CTAGATATCT----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTAGATATCT--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTAGATATCT---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAGATATCT
ACTAGTTAAC-
 A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTAGATATCT--
-AAGATATCCTT
 A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAGATATCT
--AGATAASR
 A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTAGATATCT----
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTAGATATCT
--AGATAAGA
 A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTAGATATCT
CGTCTAGACA---
 A C G T A C G T A C G T A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTAGATATCT
CTAATTAA--
 A G T C A G C T C G T A C T A G C G T A A C G T C T G A C G A T A G T C C G A T
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T