Information for 16-CYCATAYTTAGAC (Motif 19)

A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
Reverse Opposite:
A C T G A C G T A T G C A C G T C G T A C G T A C T G A A C G T C T G A C G A T A C T G C T A G T C A G
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.777
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 21.7bp
Average Position of motif in Background54.9 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISX/MA0654.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CYCATAYTTAGAC
---CTAATTAA--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T A G T C G A C T G T C A G T C A A C G T A C G T C G T A T C G A A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CYCATAYTTAGAC
--TCTAATTAAA-
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CYCATAYTTAGAC-
---ATATTTACATA
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C A C G T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

EN1/MA0027.2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CYCATAYTTAGAC
---CTAATTAG--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CYCATAYTTAGAC
---GCAATTAA--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CYCATAYTTAGAC
---NTAATTAG--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CYCATAYTTAGAC
--CCTAATTATC-
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T

DLX6/MA0882.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CYCATAYTTAGAC
---CCAATTAC--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C A C G T A C G T

Shox2/MA0720.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CYCATAYTTAGAC
---CTAATTAA--
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T A G T C G A C T G C T A G T C A G C A T C A G T G C T A T C G A A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CYCATAYTTAGAC
----TAATTAGN-
 A G T C G A T C A G T C C G T A A G C T C G T A G A C T A C G T A C G T C G T A A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T