Information for 10-GCTCCCTCTRGTGGCW (Motif 10)

A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
Reverse Opposite:
C G A T T A C G A T G C A G T C G T C A T A G C G A C T C T G A A C T G C G T A T A C G C T A G A T C G G T C A C T A G A G T C
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.723
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.7 +/- 21.0bp
Average Position of motif in Background49.8 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCTCCCTCTRGTGGCW
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCCTCTRGTGGCW-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GCTCCCTCTRGTGGCW-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTCCCTCTRGTGGCW
---CTGTCTGG-----
 A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTCCCTCTRGTGGCW
GCTCCG----------
 A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTCCCTCTRGTGGCW
-VBSYGTCTGG-----
 A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCTCTRGTGGCW
NYTTCCCGCC-------
 A C G T A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCTCCCTCTRGTGGCW--
-NANTTTCAAGTGGTTAN
 A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GCTCCCTCTRGTGGCW
-----RTCATGTGAC-
 A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCTCTRGTGGCW
NCTTCCCGCCC------
 A C G T A C T G G A T C C A G T A T G C G A T C A T G C G C A T A G T C A G C T C T G A A C T G A C G T A C T G A T C G A G T C G C T A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T