Information for 8-TGCCTCMCACTGGAGA (Motif 12)

A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A G T C A G T C C G T A A T C G C G A T A C T G A C G T A C T G C G T A A C T G C T A G A G T C C G T A
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 20.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGCCTCMCACTGGAGA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGCCTCMCACTGGAGA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTCMCACTGGAGA
TGTCTGDCACCT----
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCCTCMCACTGGAGA
CTGTCTGTCACCT----
 A C G T A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCCTCMCACTGGAGA
----TCCCNNGGGACN
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TGCCTCMCACTGGAGA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TGCCTCMCACTGGAGA
---------GTGGAT-
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TGCCTCMCACTGGAGA--
--------AATGGAAAAT
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGCCTCMCACTGGAGA
TGACTCA---------
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:TGCCTCMCACTGGAGA-
----------TGGAAAA
 A C G T A C T G A G T C A G T C A C G T A G T C G T A C A G T C C G T A A T G C A C G T A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A