Information for 23-AGAGAGAGAGAGAGAG (Motif 37)

T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
Reverse Opposite:
G A T C G A C T G A T C C G A T A G T C G A C T A G T C A C G T A T G C A C G T A G T C A G C T A T G C A G C T A T G C A G C T
p-value:1e-4
log p-value:-9.556e+00
Information Content per bp:1.765
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif27.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets23.5 +/- 18.4bp
Average Position of motif in Background51.8 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGAGAGAGAG
AGAAAGTGAAAGTGA---
 A C G T A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAGAGAG
GAAAGTGAAAGT-----
 A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAGAGAG
NNNACCGAGAGTNNN--
 A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAGAGAGAGAG---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAG
---GAAAGTGAAAGT-
 T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAGAGAG
BAGTCATANTGAAAG--
 A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG
-AGGTGNCAGACAG--
 T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAGAGAGAGAG
WNAGTCADAVTGAAACTN
 A C G T A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGAGAGAGAG
AAACAGACAAAGGAAT--
 A C G T A C G T T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG
---GAAACTGAAACT-
 T C G A T A C G C T G A T A C G C T G A A C T G C G T A A T C G C G T A A C T G C G T A T C A G C G T A C T A G C T G A C T A G
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T