Information for 18-CACGCTATAT (Motif 33)

G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T
Reverse Opposite:
C G T A G A C T C G T A G C A T C T G A T A C G A T G C A C T G C A G T A C T G
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.685
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif208.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets42.7 +/- 27.7bp
Average Position of motif in Background50.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACGCTATAT
TBGCACGCAA---
 A C G T A C G T A C G T G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACGCTATAT
CACGCA----
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACGCTATAT-----
---GCTATTTTTGGM
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CACGCTATAT-----
---KCTATTTTTRGH
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CACGCTATAT-----
---GCTATTTTTAGC
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACGCTATAT--
GTCACGCTCNCTGA
 A C G T A C G T G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACGCTATAT
ATCACCCCAT--
 A C G T A C G T G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACGCTATAT------
ATGGGATATATCCGCCT
 A C G T G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CACGCTATAT----
----CTATTTTTGG
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACGCTATAT----
----CCATATATGG
 G T A C G T C A T G A C A T C G A T G C G A C T C G T A G C A T C T G A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G