Information for 22-GTGASTAWACGGG (Motif 30)

A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C A C T G A C G T C G A T A C G T C G T A T A C G A C G T A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 23.9bp
Average Position of motif in Background36.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GTGASTAWACGGG-
------RTACGTGC
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTGASTAWACGGG-
----GGGTACGTGC
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTGASTAWACGGG
NCGTGACN-------
 A C G T A C G T A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGASTAWACGGG---------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GTGASTAWACGGG-
------GGACGTGC
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGASTAWACGGG--
-----NACACGTGCN
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GTGASTAWACGGG--
-------TACGTGCV
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGASTAWACGGG
-TGTCTAGACG--
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GTGASTAWACGGG--
-----AACACGTGTT
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GTGASTAWACGGG
-------CACGTG
 A C T G A C G T A C T G C G T A A T G C C G A T C G T A C G T A C G T A A G T C C T A G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G