Information for 21-TTGCAGTGGTGAA (Motif 28)

A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
Reverse Opposite:
G C A T A G C T A G T C C G T A A G T C A G T C C G T A A G T C A C G T C T A G A G T C C G T A C G T A
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.5 +/- 11.6bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAGTGGTGAA
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAGTGGTGAA
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TTGCAGTGGTGAA
GAACAATTGCAGTGTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCAGTGGTGAA
--GCTGTGGTTT-
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGCAGTGGTGAA
NTCAAGTGGN---
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGCAGTGGTGAA
NTCAAGTGG----
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGCAGTGGTGAA
-TTRAGTGSYK--
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGCAGTGGTGAA
BTBRAGTGSN---
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAGTGGTGAA
AACAATTTCAGTGTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGCAGTGGTGAA
CTYRAGTGSY---
 A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G C T G A C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T