Information for 14-TTGACTTTTTATT (Motif 19)

A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A C G T A C G T A C G T A C G T A A T C G A C G T G T A C C G T A C G T A
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 34.4bp
Average Position of motif in Background50.4 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTGACTTTTTATT
TTGACTTTT----
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TTGACTTTTTATT--
-----NTTTTATTGG
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TTGACTTTTTATT--
-----TTTTTATTGG
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TTGACTTTTTATT--
-----TTTTTATTGC
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TTGACTTTTTATT---
-----NTTTTATTACN
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTGACTTTTTATT-----
--NNAATTTTATTGGNTN
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TTGACTTTTTATT--
-----NTTTTATTGG
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TTGACTTTTTATT---
------TTTTATTRGN
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGACTTTTTATT-----
-NTNAATTTTATTGNATT
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTGACTTTTTATT-----
--NNANTTTTATTGGNNN
 A C G T A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G