Information for 12-AAACCCTATGAATGCA (Motif 12)

C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C T G A C T G C G A T A C G T A C G T
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.949
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 29.2bp
Average Position of motif in Background47.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAACCCTATGAATGCA----
----ACTATGAATGAATGAT
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAACCCTATGAATGCA---
--NTTNTATGAATGTGNNC
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAACCCTATGAATGCA
-NNTNTCATGAATGT-
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAACCCTATGAATGCA
TGAACTCNATGAACTC-
 A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAACCCTATGAATGCA
AAAAACCATTAAGG--
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AAACCCTATGAATGCA----
----NNNNTGAATTCANNNC
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAACCCTATGAATGCA---
----CCATTGTATGCAAAT
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAACCCTATGAATGCA
------NTGGAATGTG
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAACCCTATGAATGCA
-----CCWGGAATGY-
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AAACCCTATGAATGCA
-----CCWGGAATGY-
 C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T