Information for 1-CTGTCCRTGGTGCTGA (Motif 1)

A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A
Reverse Opposite:
A C G T G T A C C G T A A C T G A G T C C G T A A G T C A G T C C T G A G A C T C T A G C T A G G T C A A G T C C G T A C T A G
p-value:1e-103
log p-value:-2.380e+02
Information Content per bp:1.815
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 21.1bp
Average Position of motif in Background81.8 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.95
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCCRTGGTGCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----CTGTCCRTGGTGCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTCCRTGGTGCTGA
CTGTTCCTGG------
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.55
Offset:10
Orientation:forward strand
Alignment:CTGTCCRTGGTGCTGA----
----------TGCTGACTCA
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGTCCRTGGTGCTGA-
------AATTTGCTGAC
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTCCRTGGTGCTGA-----
------AAANTGCTGACTNAG
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGTCCRTGGTGCTGA
CTGACCTTTG------
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTGTCCRTGGTGCTGA--
------AAAATGCTGACT
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTGTCCRTGGTGCTGA----
--------GGTGYTGACAGS
 A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCRTGGTGCTGA
BNTGDCCTTG-------
 A C G T A G T C A C G T T A C G A C G T A G T C A G T C C T G A A G C T C T A G A C T G A C G T T C A G A G T C A C G T A C T G T G C A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T