Information for 25-CATATACGTG (Motif 28)

A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G
Reverse Opposite:
T G A C G T C A T G A C C T A G A C G T G T C A G A C T G T C A A G C T T C A G
p-value:1e-1
log p-value:-2.732e+00
Information Content per bp:1.681
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CATATACGTG-
---RTACGTGC
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATATACGTG-
-GGGTACGTGC
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CATATACGTG--
----TACGTGCV
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CATATACGTG-
---GGACGTGC
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATATACGTG--
--NACACGTGCN
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T A C G T
A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CATATACGTG
--NVCACGTG
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CATATACGTG-
---ACACGTGC
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CATATACGTG
----CACGTG
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATATACGTG--
--AACACGTGTT
 A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T A C G T
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

SRF/MA0083.3/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CATATACGTG--
TGACCATATATGGTCA
 A C G T A C G T A C G T A C G T A G T C T C G A C A G T C T G A C A G T T G C A G A T C A C T G C A G T A C T G A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A