Information for 15-GTCACGCCAT (Motif 13)

A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
Reverse Opposite:
G T C A C G A T T A C G C T A G A G T C C T A G A C G T A C T G C G T A A G T C
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.2 +/- 23.6bp
Average Position of motif in Background39.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GTCACGCCAT
ATCACCCCAT
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTCACGCCAT
ATCACCCCAT
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GTCACGCCAT
CNGTCACGCCAC
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTCACGCCAT
ATCACCCCAC
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GTCACGCCAT
AGTCACGC---
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTCACGCCAT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACGCCAT
GTCACGTGAT
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCACGCCAT
GTCACGTGAT
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTCACGCCAT
TBGCACGCAA-
 A C G T A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTCACGCCAT
--CACGCA--
 A C T G A C G T A G T C C G T A A G T C C T A G A G T C A G T C C G T A A C G T
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T