Information for 16-ACGTCAGACG (Motif 29)

C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T A C T G C G T A A G T C A C T G A C G T
p-value:1e-4
log p-value:-9.983e+00
Information Content per bp:1.530
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.33%
Number of Background Sequences with motif1690.5
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets46.9 +/- 24.7bp
Average Position of motif in Background49.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ACGTCAGACG
ACGTCA----
 C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACGTCAGACG
TTACGTCATN--
 A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACGTCAGACG
TACGTCAT---
 A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ACGTCAGACG
TGACGTCA----
 A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACGTCAGACG---
---CCAGACRSVB
 C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Gmeb1/MA0615.1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACGTCAGACG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACGTCAGACG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACGTCAGACG
CGGTGACGTCAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACGTCAGACG-
---CCAGACAG
 C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACGTCAGACG
AATGCCACGTCATC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T