Information for 6-TGGGCGGACGTGGACC (Motif 24)

A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A G T C C G T A A G T C A C T G A C G T A G T C A G T C A C T G A G T C A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 17.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGGCGGACGTGGACC
-NCGCGGACGTTG---
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGGCGGACGTGGACC
-----GGACGTGC---
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGGGCGGACGTGGACC
--AGCGGAAGTG----
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGGCGGACGTGGACC-
---GATGACGTGGCANT
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGGCGGACGTGGACC--
--ATTGGACTTTGACCCC
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCGGACGTGGACC
NNNTNGGGCGTATNNTN---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGGGCGGACGTGGACC
---GGGTACGTGC---
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGGGCGGACGTGGACC
NGCGTGGGCGGR--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGGCGGACGTGGACC
--NGATGACGTGGCAN
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T A C G T A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGGCGGACGTGGACC
---CCGGAAGTGGC--
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C A G T C
A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T A C G T