Information for 13-GWTTYAGWCTGMA (Motif 16)

C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G C G T A G T A C A C G T C T A G C G T A C G T A C G T A A G T C
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 11.6bp
Average Position of motif in Background51.8 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GWTTYAGWCTGMA---
NAGTTTCABTHTGACTNW
 A C G T A C G T C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GWTTYAGWCTGMA--
BAGTCATANTGAAAG
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GWTTYAGWCTGMA
----TWGTCTGV-
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GWTTYAGWCTGMA
TGGTTTCAGT-----
 A C G T A C G T C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GWTTYAGWCTGMA
---TGAGTCAGCA
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GWTTYAGWCTGMA
----CTGTCTGG-
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GWTTYAGWCTGMA
----NNNANTGA-
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GWTTYAGWCTGMA-----
-NCTANGTCAGCAAATTT
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GWTTYAGWCTGMA
-TTTGAAACCG--
 C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GWTTYAGWCTGMA
AGGTGNCAGACAG--
 A C G T A C G T C T A G C G A T A C G T A C G T A G T C C G T A A C T G C G A T G T A C A C G T A C T G G T C A C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T