Information for 10-TTATGCAAAT (Motif 8)

C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T
Reverse Opposite:
T C G A A G C T A C G T A C G T C T A G A G T C C T G A C A G T C T G A G T C A
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.703
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif365.5
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets44.3 +/- 23.1bp
Average Position of motif in Background51.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TTATGCAAAT
TTATGCAAAT
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TTATGCAAAT---
ATATGCAAATNNN
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TTATGCAAAT
ATATGCAAAT
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TTATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TTATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TTATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-TTATGCAAAT-
AATATGCAAATT
 A C G T C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.91
Offset:1
Orientation:forward strand
Alignment:TTATGCAAAT
-TATGCAAAT
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.90
Offset:1
Orientation:forward strand
Alignment:TTATGCAAAT
-TATGCAAAT
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TTATGCAAAT--
TTATGCAAATTA
 C A G T G A C T G T C A G A C T C T A G G A T C C G T A G T C A C T G A A G C T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A