Information for 1-NNDHTGTGGTTKN (Motif 3)

C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
Reverse Opposite:
G T C A G T C A T C G A T C G A A G T C G A T C C T G A G T A C C G T A C T A G G T A C A G T C G C A T
p-value:1e-48
log p-value:-1.115e+02
Information Content per bp:1.521
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif24.47%
Number of Background Sequences with motif3523.4
Percentage of Background Sequences with motif7.57%
Average Position of motif in Targets49.3 +/- 24.1bp
Average Position of motif in Background50.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
-NNHTGTGGTTWN
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NNDHTGTGGTTKN
-GTCTGTGGTTT-
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
--NNTGTGGTTT-
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
---CTGTGGTTTN
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.95
Offset:2
Orientation:forward strand
Alignment:NNDHTGTGGTTKN
--GCTGTGGTTT-
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
--TTTGCGGTTT-
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
---TTGCGGTTT-
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.80
Offset:5
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
-----GTGGAT--
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:NNDHTGTGGTTKN
-NTCGGTGGTCGC
 C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--NNDHTGTGGTTKN
ACAGGATGTGGT---
 A C G T A C G T C G T A T C A G C A T G G A T C G C A T C A T G G A C T C T A G A C T G A C G T A G C T C A G T C A G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T