Information for 8-ACAATGACAGAWA (Motif 9)

C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
Reverse Opposite:
A G C T C G T A C A G T A G T C A C G T A C T G A C G T G T A C G T C A C A G T A C G T A C T G A G C T
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.789
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 25.0bp
Average Position of motif in Background53.5 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACAATGACAGAWA
---TTGACAG---
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACAATGACAGAWA---
GATATTGACAGCTGCGT
 A C G T C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ACAATGACAGAWA
---TTGACAGG--
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACAATGACAGAWA
---TTGACAGC--
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAATGACAGAWA
--RHTGWCAR---
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGACAGAWA
GACAATGNN-----
 A C G T C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACAATGACAGAWA---
NNATTGACAGGTGCTT
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACAATGACAGAWA---
GTATTGACAGGTNNTT
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACAATGACAGAWA---
NTATTGACAGCTNNTT
 C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATGACAGAWA
NNNTAACAATTATAN---
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C G T C A G C T A A C G T A C T G C G T A A G T C C G T A T C A G G C T A C G A T C T G A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T