Information for 14-WMTTTGCATG (Motif 20)

C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G
Reverse Opposite:
A G T C G T C A A C G T C T A G G A T C C G T A C G T A C T G A A C T G G C T A
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.736
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif384.6
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets45.4 +/- 24.7bp
Average Position of motif in Background49.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:WMTTTGCATG-
-ATTTGCATAA
 C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--WMTTTGCATG
BTVATTWGCATA
 A C G T A C G T C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--WMTTTGCATG-
TTCATTTGCATAT
 A C G T A C G T C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:WMTTTGCATG-
-ATTTGCATAT
 C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:WMTTTGCATG
-ATTTGCATA
 C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---WMTTTGCATG---
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---WMTTTGCATG---
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---WMTTTGCATG---
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:WMTTTGCATG
-ATTTGCATA
 C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:WMTTTGCATG--
AATTTGCATANT
 C G A T T G A C A G C T A C G T C G A T C T A G A G T C G T C A C A G T C T A G A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T