Information for 10-CAGAGCCTGGGATTTC (Motif 16)

A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C T G A A C G T A G T C A G T C A G T C C G T A C T A G A C T G A G T C A C G T A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 23.1bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC-
-------GGGGATTTCC
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC-
-------GGGAATTTCC
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC-
-------GGGGATTTCC
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC--
------NGGGGATTTCCC
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-10
Orientation:forward strand
Alignment:----------CAGAGCCTGGGATTTC
GAGCCTGGTACTGWGCCTGR------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC
---WDNCTGGGCA---
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CAGAGCCTGGGATTTC-
-------GGGAATTTCC
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGAGCCTGGGATTTC
-GGGGCCGAGGCCTG-
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CAGAGCCTGGGATTTC--
---TGCCTGCGYCMCCTT
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CAGAGCCTGGGATTTC
------CNGTGATTTN
 A G T C C G T A A C T G G T C A A C T G A G T C A G T C C G A T A C T G A C T G A C T G G T C A A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G