Information for 5-GCCCCGGGATKCYCCT (Motif 9)

C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
Reverse Opposite:
C G T A A T C G C A T G C T G A C T A G G T C A G C T A G C A T A G T C T G A C G A T C C A T G A C T G C A T G A T C G G A T C
p-value:1e-14
log p-value:-3.434e+01
Information Content per bp:1.668
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 28.9bp
Average Position of motif in Background44.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCCCGGGATKCYCCT
---AGGGGATTCCCCT
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCCCGGGATKCYCCT
---AGGGGATTCCCCT
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCCCGGGATKCYCCT
-----GGGGATTTCC-
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCCCGGGATKCYCCT
----GGGGATTCCCCC
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCCCCGGGATKCYCCT
-----GGGAATTTCC-
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCCCGGGATKCYCCT
-----GGGAATTTCC-
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCCCCGGGATKCYCCT-
-----GGGAAATCCCCN
 C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCGGGATKCYCCT
TGCCCAGNHW-------
 A C G T C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCGGGATKCYCCT
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGGGATKCYCCT
ATGCCCGGGCATGT----
 A C G T A C G T C T A G A T G C G T A C G T A C G T A C C T A G A C T G T C A G C G T A C G A T C A G T G A T C A G C T G T A C T A G C G A C T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T