Information for 16-TGTCACTCTGCCC (Motif 24)

A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
Reverse Opposite:
A C T G A C T G C T A G A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A G T C G T C A
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.766
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.7 +/- 20.0bp
Average Position of motif in Background53.4 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTGCCC
NAGGTCACNNTGACC
 A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGTCACTCTGCCC-
AGGTCACCCTGACCT
 A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTGCCC
NCTGTCAATCAN---
 A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTGCCC
SCTGTCAVTCAV---
 A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTGCCC--
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGTCACTCTGCCC---
-------CTGCCCGCA
 A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTGCCC
GSCTGTCACTCA----
 A C G T A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTGCCC----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTCTGCCC
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTCACTCTGCCC-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G A C G T G T A C G T C A T A G C A C G T A T G C C G A T C T A G A G T C A G T C T A G C A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A