Information for 13-GAKGAGCTRCKRG (Motif 22)

C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C G T C A A C T G G A T C C G T A A C T G A G T C A C G T A G T C G T C A A C G T A G T C
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 22.6bp
Average Position of motif in Background57.3 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAKGAGCTRCKRG
-AGCAGCTGCT--
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAKGAGCTRCKRG
-CGCAGCTGCG--
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAKGAGCTRCKRG-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAKGAGCTRCKRG
-AGCAGCTGCTNN
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAKGAGCTRCKRG---
-AGATGCTRCTRCCHT
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAKGAGCTRCKRG----
-TNNTGCTACTGTNNNN
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAKGAGCTRCKRG----
-ACATGCTACCTAATAC
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAKGAGCTRCKRG
---CAGCC-----
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAKGAGCTRCKRG----
-CNNNGCTACTGTANNN
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAKGAGCTRCKRG
-ATCAGCTGTT--
 C T A G C G T A A C G T C T A G C G T A A C T G A G T C A C G T C T A G A G T C A C G T C T A G A C T G
A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T