Information for 12-TCAGCTGTCAGTCACA (Motif 21)

A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T C T A G C T G A A T G C C G A T A C T G G T C A A T G C C T G A T A C G G T A C C G A T C T A G C G T A
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 27.1bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCAGCTGTCAGTCACA
---SCTGTCAVTCAV-
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCAGCTGTCAGTCACA
---NCTGTCAATCAN-
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAGCTGTCAGTCACA
--GSCTGTCACTCA--
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCAGCTGTCAGTCACA-
----CTGTCTGTCACCT
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCAGCTGTCAGTCACA-
-----TGTCTGDCACCT
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAGCTGTCAGTCACA
GTCWGCTGTYYCTCT--
 A C G T A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTGTCAGTCACA
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:TCAGCTGTCAGTCACA----
----------GTCACATGAY
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCAGCTGTCAGTCACA--
--ATTGATGAGTCACCAA
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:TCAGCTGTCAGTCACA---
-----------TCACACCT
 A C G T A G T C G C T A C A T G A G T C A G C T T A C G A C G T A G T C C G T A A T C G A G C T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T