Information for 8-BCAHCTGCTR (Motif 9)

A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
Reverse Opposite:
A G C T T C G A T A C G T G A C G C T A C T A G C A G T C A G T A C T G T C A G
p-value:1e-14
log p-value:-3.236e+01
Information Content per bp:1.634
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif920.3
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets49.6 +/- 22.1bp
Average Position of motif in Background50.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--BCAHCTGCTR
SNGCACCTGCHS
 A C G T A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----BCAHCTGCTR---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-BCAHCTGCTR-
NVCAGCTGBBNN
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-BCAHCTGCTR
ACCATCTGTT-
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-BCAHCTGCTR
AGCAGCTGCT-
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-BCAHCTGCTR
GCCATCTGTT-
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---BCAHCTGCTR---
CNGACACCTGTTCNNN
 A C G T A C G T A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:BCAHCTGCTR
-CAGCTGNT-
 A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-BCAHCTGCTR
AACACCTGCT-
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-BCAHCTGCTR
NNCACCTGNN-
 A C G T A G T C G T A C G T C A G T C A G A T C C G A T A C T G A T G C A G C T T C G A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T