Information for 16-TCGTCACATCTCA (Motif 16)

A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A
Reverse Opposite:
A C G T A T C G C T G A T C A G G T C A A C G T A C T G A C G T A T C G C T G A G T A C T A C G C T G A
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.715
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif172.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets43.0 +/- 26.3bp
Average Position of motif in Background52.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCGTCACATCTCA--
NNNNTGACCTTTNNNN
 A C G T A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCGTCACATCTCA--
NNNGTGACCTTTGNNN
 A C G T A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCGTCACATCTCA----
-AAAGACCTGTCAATCC
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCGTCACATCTCA
-TGACACCTGTCA
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGTCACATCTCA----
-AAAGACCTGTCAATAC
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCGTCACATCTCA----
---TGACCTTTGACCTC
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGTCACATCTCA--
---TGACCTTTNCNT
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGTCACATCTCA----
-AATTACCTGTCAATAC
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCGTCACATCTCA----
---TGACCTTTGACCTN
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGTCACATCTCA----
-AACGAGCTGTCAATAC
 A G C T A T G C A C T G A G C T A T G C C G T A G T A C G T C A A C G T A G T C A G C T T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C