p-value: | 1e-3 |
log p-value: | -9.185e+00 |
Information Content per bp: | 1.523 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.37% |
Number of Background Sequences with motif | 5.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.0 +/- 32.7bp |
Average Position of motif in Background | 68.4 +/- 17.3bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AKHACTTGCG AAGCACTTAA- |
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POL005.1_DPE/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AKHACTTGCG NACATCTTN-- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AKHACTTGCG- CNTTAAGTACTTAANG |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AKHACTTGCG-- TTCNAAGTACTTNNNNN |
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ETV6/MA0645.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKHACTTGCG-- --CACTTCCGCT |
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PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AKHACTTGCG---- CAATCACTGGCAGAAT |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AKHACTTGCG-- -NNACTTGCCTT |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AKHACTTGCG- NATTTAAGTACTTANNA |
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ETS(ETS)/Promoter/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AKHACTTGCG--- ---ACTTCCGGTT |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AKHACTTGCG MRSCACTYAA- |
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