Information for 24-CAAATTGACCAAA (Motif 24)

A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A C T G A A C G T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 18.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAAATTGACCAAA
---ATTGCGCAAC
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAAATTGACCAAA
NAGGTCACNNTGACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAAATTGACCAAA-----
----TTGACCTANTTATN
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAATTGACCAAA------
--NANAGATCAAAGGGNNN
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAATTGACCAAA------
--NNNAGATCAAAGGANNN
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAAATTGACCAAA
-----TGACCT--
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAAATTGACCAAA--
-----TGACCTARTT
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAAATTGACCAAA
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAAATTGACCAAA------
--TATAGATCAAAGGAAAA
 A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAAATTGACCAAA
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A G T C C G T A G T C A C G T A A G C T A C G T A C T G C G T A A T G C A G T C C G T A C G T A C G T A
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C