Information for 17-AATTACTGTTGAT (Motif 20)

C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
Reverse Opposite:
C G T A A C G T A G T C C G T A C T G A A G T C C G T A A C T G C G A T C G T A C G T A A G C T A C G T
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 14.9bp
Average Position of motif in Background47.1 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATTACTGTTGAT
AATTAGTG-----
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATTACTGTTGAT
GTAGTAATTAATGCAA--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A A C G T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATTACTGTTGAT
TAAGTAATTAGTTATA--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATTACTGTTGAT
ACTTCCTGTT---
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATTACTGTTGAT
ATTTCCTGTN---
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATTACTGTTGAT---
-AAAWWTGCTGACWWD
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T A C G T A C G T A C G T
A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATTACTGTTGAT-----
NAAAANTGCTGACTCAGC
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATTACTGTTGAT
AATTATT------
 C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATTACTGTTGAT
GTACTAATTAGTGGCG--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AATTACTGTTGAT
TTGGGGTAATTAACGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C T A A G T C A C G T A C T G A G C T A C G T A C T G C G T A C G A T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T A C G T A C G T A C G T