Information for 14-CACCTGCTGA (Motif 19)

T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A
Reverse Opposite:
G C A T A G T C C G T A C T A G A G T C C G T A C T A G T C A G A G C T A C T G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.831
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets55.1 +/- 25.7bp
Average Position of motif in Background44.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CACCTGCTGA
SNGCACCTGCHS-
 A C G T A C G T A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGCTGA-
CCCCCTGCTGTG
 A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CACCTGCTGA--
--CCTGCTGAGH
 T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CACCTGCTGA--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGCTGA
NCACCTGTN--
 A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGCTGA----
TCNCCTGCTGNGNNN
 A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGCTGA----
TNTCCTGCTGTGNNG
 A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACCTGCTGA
NNCACCTGNN--
 A C G T A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CACCTGCTGA--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACCTGCTGA
AACACCTGCT--
 A C G T A C G T T G A C T C G A A G T C A G T C C G A T C T A G A G T C A C G T A C T G C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T