Information for 11-GTCTAAAATA (Motif 12)

C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
C G A T C G T A C G A T A C G T C G A T A C G T C T G A T A C G C G T A G T A C
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.862
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.0 +/- 30.2bp
Average Position of motif in Background48.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCTAAAATA--
DCYAAAAATAGM
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCTAAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCTAAAATA--
KCCAAAAATAGC
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCTAAAATA--
GCTAAAAATAGC
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTCTAAAATA-
-CCAAAAATAG
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCTAAAATA---
NNNTTTNTAATACNG
 A C G T A C G T C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCTAAAATA------
GTTCAAAAAAAAAATTC
 A C G T C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCTAAAATA-----
GTATAAAAGGCGGGG
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCTAAAATA-----
GTATAAAAGGCGGGG
 C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCTAAAATA---
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C G T C A T G A C G T A T G C G A C T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C